Sphingobium indicum str. DSM 26779

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum str. DSM 26779 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats under aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is part of the Sphingobium genus, which is characterized by its ability to degrade a variety of organic compounds, suggesting potential roles in bioremediation processes within its natural environment. The Gram-negative cell wall structure of Sphingobium indicum str. DSM 26779 is indicative of its resilience and adaptability, as this feature typically confers protection against certain environmental stresses. The rod shape may facilitate motility and nutrient uptake, enhancing its survival in soil ecosystems where competition for resources is high. Given its aerobic requirement, Sphingobium indicum str. DSM 26779 likely participates in various biochemical cycles, contributing to the degradation of organic matter and the cycling of carbon and nutrients in terrestrial environments. Its optimal growth temperature suggests a preference for temperate conditions, which may align with seasonal variations in its habitat, potentially influencing its metabolic activities during different times of the year. Overall, Sphingobium indicum str. DSM 26779 exemplifies the complex interactions within terrestrial microbial communities, where its metabolic capabilities may help mitigate environmental pollutants and maintain soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainDSM 26779

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum str. DSM 26779
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum strain DSM 26779

Gene Summary

Adenine Count

720925 bp

Thymine Count

719106 bp

Guanine Count

1363622 bp

Cytosine Count

1362234 bp

Genome Length

4167825 bp

Protein-coding Genes

3835 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalamin biosynthesis protein cobdEWH08_13255Not AvailablePositive2739990 - 274092532928.2
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseEWH08_13260Not AvailablePositive2740931 - 274143417951.9
efflux transporter outer membrane subunitEWH08_13265Not AvailableNegative2741468 - 274284448632.7
efflux rnd transporter permease subunitEWH08_13270Not AvailableNegative2742841 - 2745984112371.0
efflux rnd transporter periplasmic adaptor subunitEWH08_13275Not AvailableNegative2745997 - 274712739637.8
response regulator transcription factorEWH08_13280Not AvailablePositive2747370 - 274809826890.5
hamp domain-containing histidine kinaseEWH08_13285Not AvailablePositive2748117 - 274948749540.2
hypothetical proteinEWH08_13290Not AvailablePositive2749760 - 27499547769.55
prka family serine protein kinaseEWH08_13295Not AvailablePositive2749951 - 275189474406.6
yeah/yhbh family proteinEWH08_13300Not AvailablePositive2751914 - 275322149587.1

Displaying genes 2621 – 2630 of 3906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.