Sphingobium indicum str. DSM 26779

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum str. DSM 26779 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats under aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is part of the Sphingobium genus, which is characterized by its ability to degrade a variety of organic compounds, suggesting potential roles in bioremediation processes within its natural environment. The Gram-negative cell wall structure of Sphingobium indicum str. DSM 26779 is indicative of its resilience and adaptability, as this feature typically confers protection against certain environmental stresses. The rod shape may facilitate motility and nutrient uptake, enhancing its survival in soil ecosystems where competition for resources is high. Given its aerobic requirement, Sphingobium indicum str. DSM 26779 likely participates in various biochemical cycles, contributing to the degradation of organic matter and the cycling of carbon and nutrients in terrestrial environments. Its optimal growth temperature suggests a preference for temperate conditions, which may align with seasonal variations in its habitat, potentially influencing its metabolic activities during different times of the year. Overall, Sphingobium indicum str. DSM 26779 exemplifies the complex interactions within terrestrial microbial communities, where its metabolic capabilities may help mitigate environmental pollutants and maintain soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainDSM 26779

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum str. DSM 26779
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum strain DSM 26779

Gene Summary

Adenine Count

720925 bp

Thymine Count

719106 bp

Guanine Count

1363622 bp

Cytosine Count

1362234 bp

Genome Length

4167825 bp

Protein-coding Genes

3835 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseEWH08_12900Not AvailablePositive2653253 - 265404427123.5
alpha/beta hydrolaseEWH08_12905Not AvailableNegative2654096 - 265507335905.6
fad-dependent oxidoreductaseEWH08_12910Not AvailablePositive2655377 - 265707758996.5
pqq-dependent dehydrogenase, methanol/ethanol familyEWH08_12915Not AvailableNegative2657146 - 265923675292.0
nuclear transport factor 2 family proteinEWH08_12920Not AvailableNegative2659283 - 265966914468.1
coa transferaseEWH08_12925Not AvailablePositive2660119 - 266121038436.2
acetyl-coa c-acetyltransferaseEWH08_12930Not AvailablePositive2661267 - 266247241942.4
3-hydroxyacyl-coa dehydrogenaseEWH08_12935Not AvailablePositive2662483 - 266467877532.3
tetr/acrr family transcriptional regulatorEWH08_12940Not AvailablePositive2664976 - 266575528347.1
acyl-coa dehydrogenaseEWH08_12945Not AvailableNegative2665813 - 266705444330.5

Displaying genes 2551 – 2560 of 3906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.