Sphingobium indicum str. DSM 26779

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum str. DSM 26779 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats under aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is part of the Sphingobium genus, which is characterized by its ability to degrade a variety of organic compounds, suggesting potential roles in bioremediation processes within its natural environment. The Gram-negative cell wall structure of Sphingobium indicum str. DSM 26779 is indicative of its resilience and adaptability, as this feature typically confers protection against certain environmental stresses. The rod shape may facilitate motility and nutrient uptake, enhancing its survival in soil ecosystems where competition for resources is high. Given its aerobic requirement, Sphingobium indicum str. DSM 26779 likely participates in various biochemical cycles, contributing to the degradation of organic matter and the cycling of carbon and nutrients in terrestrial environments. Its optimal growth temperature suggests a preference for temperate conditions, which may align with seasonal variations in its habitat, potentially influencing its metabolic activities during different times of the year. Overall, Sphingobium indicum str. DSM 26779 exemplifies the complex interactions within terrestrial microbial communities, where its metabolic capabilities may help mitigate environmental pollutants and maintain soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainDSM 26779

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum str. DSM 26779
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum strain DSM 26779

Gene Summary

Adenine Count

720925 bp

Thymine Count

719106 bp

Guanine Count

1363622 bp

Cytosine Count

1362234 bp

Genome Length

4167825 bp

Protein-coding Genes

3835 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
utp--glucose-1-phosphate uridylyltransferaseEWH08_10860Not AvailableNegative2240649 - 224154832069.9
hypothetical proteinEWH08_10865Not AvailableNegative2241632 - 224206015859.4
duf1674 domain-containing proteinEWH08_10870Not AvailableNegative2242261 - 22424346362.49
zinc metalloprotease htpxEWH08_10875Not AvailablePositive2242531 - 224345132114.0
heparinaseEWH08_10880Not AvailableNegative2243501 - 224526763084.9
ribulose-phosphate 3-epimeraseEWH08_10885Not AvailableNegative2245264 - 224592623460.4
diguanylate cyclaseEWH08_10890Not AvailableNegative2246031 - 224651617880.6
methyltransferase domain-containing proteinEWH08_10895Not AvailableNegative2246561 - 224785045360.7
metalloendopeptidaseEWH08_10900Not AvailableNegative2247930 - 224916543530.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhEWH08_10905Not AvailableNegative2249435 - 224985715758.2

Displaying genes 2151 – 2160 of 3906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.