Sphingobium indicum str. DSM 26779

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum str. DSM 26779 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats under aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is part of the Sphingobium genus, which is characterized by its ability to degrade a variety of organic compounds, suggesting potential roles in bioremediation processes within its natural environment. The Gram-negative cell wall structure of Sphingobium indicum str. DSM 26779 is indicative of its resilience and adaptability, as this feature typically confers protection against certain environmental stresses. The rod shape may facilitate motility and nutrient uptake, enhancing its survival in soil ecosystems where competition for resources is high. Given its aerobic requirement, Sphingobium indicum str. DSM 26779 likely participates in various biochemical cycles, contributing to the degradation of organic matter and the cycling of carbon and nutrients in terrestrial environments. Its optimal growth temperature suggests a preference for temperate conditions, which may align with seasonal variations in its habitat, potentially influencing its metabolic activities during different times of the year. Overall, Sphingobium indicum str. DSM 26779 exemplifies the complex interactions within terrestrial microbial communities, where its metabolic capabilities may help mitigate environmental pollutants and maintain soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainDSM 26779

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum str. DSM 26779
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum strain DSM 26779

Gene Summary

Adenine Count

720925 bp

Thymine Count

719106 bp

Guanine Count

1363622 bp

Cytosine Count

1362234 bp

Genome Length

4167825 bp

Protein-coding Genes

3835 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family dna-binding transcriptional regulatorEWH08_06740Not AvailablePositive1401689 - 140273537119.2
adenylosuccinate lyaseEWH08_06745Not AvailableNegative1402861 - 140417448929.8
ef-hand domain-containing proteinEWH08_06750Not AvailablePositive1404361 - 140483416120.1
hypothetical proteinEWH08_06755Not AvailableNegative1404935 - 14051236153.28
dna ligase dEWH08_06760Not AvailableNegative1405521 - 140801090990.7
ku proteinEWH08_06765Not AvailableNegative1408014 - 140891333249.0
fumarylacetoacetate hydrolaseEWH08_06770Not AvailablePositive1409048 - 141017539561.2
sdr family oxidoreductaseEWH08_06775Not AvailablePositive1410172 - 141093027244.6
smp-30/gluconolactonase/lre family proteinEWH08_06780Not AvailablePositive1410935 - 141180731173.8
mfs transporterEWH08_06785Not AvailablePositive1411829 - 141324149176.6

Displaying genes 1361 – 1370 of 3906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.