Nonlabens spongiae str. JCM 13191

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens spongiae strain JCM 13191 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism thrives optimally at a temperature of 29.0°C, suggesting a preference for moderately warm environments, which may be indicative of its natural habitat. The Gram-negative nature of Nonlabens spongiae implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a critical role in its interaction with the surrounding environment, including its resistance to certain antibiotics and its ability to engage with other microbial communities. The absence of sporulation indicates that this strain relies on vegetative growth for reproduction and survival, which may influence its adaptability to fluctuating environmental conditions. Understanding the physiological characteristics of Nonlabens spongiae strain JCM 13191 contributes to the broader knowledge of microbial diversity, particularly in aquatic ecosystems, where such bacteria may play a role in nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions suggests that this bacterium may be involved in processes that require oxygen, potentially influencing the microbial dynamics in its ecological niche. Further research into its metabolic capabilities could reveal additional ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens spongiae
StrainJCM 13191

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens spongiae strain JCM 13191 chromosome, complete genome.

Gene Summary

Adenine Count

1006586 bp

Thymine Count

1007554 bp

Guanine Count

684679 bp

Cytosine Count

680457 bp

Genome Length

3379276 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBST97_RS02580Not AvailableNegative554795 - 55520214649.9
wd40/yvtn/bnr-like repeat-containing proteinBST97_RS02585Not AvailablePositive555325 - 558630123108.0
grea/greb family elongation factorBST97_RS02590Not AvailableNegative558701 - 55920718971.9
septal ring lytic transglycosylase rlpa family proteinBST97_RS02595Not AvailableNegative559327 - 56005827206.1
diaminopimelate decarboxylaseBST97_RS02600Not AvailableNegative560173 - 56140245363.2
adp-forming succinate--coa ligase subunit betaBST97_RS02605Not AvailablePositive561648 - 56284142980.3
translocation/assembly module tamb domain-containing proteinBST97_RS02610Not AvailableNegative562949 - 567376165247.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadBST97_RS02615Not AvailablePositive567450 - 56846636775.4
16s rrna (uracil(1498)-n(3))-methyltransferaseBST97_RS02620Not AvailablePositive568467 - 56918326882.2
duf4159 domain-containing proteinBST97_RS02625Not AvailablePositive569241 - 56988223884.3

Displaying genes 521 – 530 of 3136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.