Nonlabens spongiae str. JCM 13191

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens spongiae strain JCM 13191 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism thrives optimally at a temperature of 29.0°C, suggesting a preference for moderately warm environments, which may be indicative of its natural habitat. The Gram-negative nature of Nonlabens spongiae implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a critical role in its interaction with the surrounding environment, including its resistance to certain antibiotics and its ability to engage with other microbial communities. The absence of sporulation indicates that this strain relies on vegetative growth for reproduction and survival, which may influence its adaptability to fluctuating environmental conditions. Understanding the physiological characteristics of Nonlabens spongiae strain JCM 13191 contributes to the broader knowledge of microbial diversity, particularly in aquatic ecosystems, where such bacteria may play a role in nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions suggests that this bacterium may be involved in processes that require oxygen, potentially influencing the microbial dynamics in its ecological niche. Further research into its metabolic capabilities could reveal additional ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens spongiae
StrainJCM 13191

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens spongiae strain JCM 13191 chromosome, complete genome.

Gene Summary

Adenine Count

1006586 bp

Thymine Count

1007554 bp

Guanine Count

684679 bp

Cytosine Count

680457 bp

Genome Length

3379276 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine pyrophosphate-dependent enzymeBST97_RS02480Not AvailablePositive535658 - 53765874283.7
hypothetical proteinBST97_RS02485Not AvailablePositive537870 - 5381129197.11
type ii toxin-antitoxin system rele/pare family toxinBST97_RS02490Not AvailablePositive538094 - 53840812312.0
nad(p)/fad-dependent oxidoreductaseBST97_RS02495Not AvailablePositive538436 - 53955741873.2
atp-dependent dna helicase recgBST97_RS02500Not AvailablePositive539653 - 54175879881.4
tetr/acrr family transcriptional regulatorBST97_RS02505Not AvailablePositive541852 - 54252025989.5
peptidase domain-containing abc transporterBST97_RS02510Not AvailablePositive542523 - 54420263548.4
hlyd family secretion proteinBST97_RS02515Not AvailablePositive544205 - 54557852036.4
tolc family proteinBST97_RS02520Not AvailablePositive545562 - 54702855609.7
23s rrna pseudouridine(2604) synthase rlufBST97_RS02525Not AvailableNegative547040 - 54778028397.5

Displaying genes 501 – 510 of 3136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.