Nonlabens spongiae str. JCM 13191

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens spongiae strain JCM 13191 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism thrives optimally at a temperature of 29.0°C, suggesting a preference for moderately warm environments, which may be indicative of its natural habitat. The Gram-negative nature of Nonlabens spongiae implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a critical role in its interaction with the surrounding environment, including its resistance to certain antibiotics and its ability to engage with other microbial communities. The absence of sporulation indicates that this strain relies on vegetative growth for reproduction and survival, which may influence its adaptability to fluctuating environmental conditions. Understanding the physiological characteristics of Nonlabens spongiae strain JCM 13191 contributes to the broader knowledge of microbial diversity, particularly in aquatic ecosystems, where such bacteria may play a role in nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions suggests that this bacterium may be involved in processes that require oxygen, potentially influencing the microbial dynamics in its ecological niche. Further research into its metabolic capabilities could reveal additional ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens spongiae
StrainJCM 13191

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens spongiae strain JCM 13191 chromosome, complete genome.

Gene Summary

Adenine Count

1006586 bp

Thymine Count

1007554 bp

Guanine Count

684679 bp

Cytosine Count

680457 bp

Genome Length

3379276 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenase family proteinBST97_RS02180Not AvailableNegative464021 - 46480929683.3
duf368 domain-containing proteinBST97_RS02185Not AvailableNegative464784 - 46580338156.4
duf368 domain-containing proteinBST97_RS02190Not AvailableNegative465804 - 46676334884.8
m24 family metallopeptidaseBST97_RS02195Not AvailableNegative466895 - 46757225888.6
hypothetical proteinBST97_RS02200Not AvailableNegative467578 - 4677908126.58
endonuclease domain-containing proteinBST97_RS02205Not AvailableNegative468295 - 46866614792.8
endonuclease domain-containing proteinBST97_RS02210Not AvailableNegative469095 - 46946614819.0
nucleoside triphosphate pyrophosphohydrolase family proteinBST97_RS02215Not AvailablePositive469798 - 47018414666.7
yebc/pmpr family dna-binding transcriptional regulatorBST97_RS02220Not AvailablePositive470260 - 47100327861.4
lysm peptidoglycan-binding domain-containing proteinBST97_RS02225Not AvailablePositive471230 - 47160714180.9

Displaying genes 441 – 450 of 3136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.