Nonlabens spongiae str. JCM 13191

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens spongiae strain JCM 13191 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism thrives optimally at a temperature of 29.0°C, suggesting a preference for moderately warm environments, which may be indicative of its natural habitat. The Gram-negative nature of Nonlabens spongiae implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a critical role in its interaction with the surrounding environment, including its resistance to certain antibiotics and its ability to engage with other microbial communities. The absence of sporulation indicates that this strain relies on vegetative growth for reproduction and survival, which may influence its adaptability to fluctuating environmental conditions. Understanding the physiological characteristics of Nonlabens spongiae strain JCM 13191 contributes to the broader knowledge of microbial diversity, particularly in aquatic ecosystems, where such bacteria may play a role in nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions suggests that this bacterium may be involved in processes that require oxygen, potentially influencing the microbial dynamics in its ecological niche. Further research into its metabolic capabilities could reveal additional ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens spongiae
StrainJCM 13191

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens spongiae strain JCM 13191 chromosome, complete genome.

Gene Summary

Adenine Count

1006586 bp

Thymine Count

1007554 bp

Guanine Count

684679 bp

Cytosine Count

680457 bp

Genome Length

3379276 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6364 family proteinBST97_RS12175Not AvailablePositive2655863 - 26561239904.94
type ii toxin-antitoxin system vapc family toxinBST97_RS12180Not AvailablePositive2656120 - 265652715412.5
gliding motility-associated abc transporter atp-binding subunit gldaBST97_RS12185Not AvailableNegative2656529 - 265744034797.1
prephenate dehydrataseBST97_RS12190Not AvailablePositive2657739 - 265855129400.3
pyridoxal phosphate-dependent aminotransferaseBST97_RS12195Not AvailablePositive2658548 - 265971143495.6
prephenate dehydrogenaseBST97_RS12200Not AvailablePositive2659704 - 266056432178.6
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type iiBST97_RS12205Not AvailablePositive2660554 - 266163640927.0
dihydrolipoyl dehydrogenase family proteinBST97_RS12210Not AvailablePositive2661691 - 266302849319.4
carbon-nitrogen hydrolase family proteinBST97_RS12215Not AvailablePositive2663075 - 266402235403.2
pseudouridine synthaseBST97_RS12220Not AvailablePositive2664132 - 266504634160.4

Displaying genes 2441 – 2450 of 3136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.