Nonlabens spongiae str. JCM 13191

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens spongiae strain JCM 13191 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and does not form spores. This organism thrives optimally at a temperature of 29.0°C, suggesting a preference for moderately warm environments, which may be indicative of its natural habitat. The Gram-negative nature of Nonlabens spongiae implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may play a critical role in its interaction with the surrounding environment, including its resistance to certain antibiotics and its ability to engage with other microbial communities. The absence of sporulation indicates that this strain relies on vegetative growth for reproduction and survival, which may influence its adaptability to fluctuating environmental conditions. Understanding the physiological characteristics of Nonlabens spongiae strain JCM 13191 contributes to the broader knowledge of microbial diversity, particularly in aquatic ecosystems, where such bacteria may play a role in nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions suggests that this bacterium may be involved in processes that require oxygen, potentially influencing the microbial dynamics in its ecological niche. Further research into its metabolic capabilities could reveal additional ecological functions and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens spongiae
StrainJCM 13191

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens spongiae strain JCM 13191 chromosome, complete genome.

Gene Summary

Adenine Count

1006586 bp

Thymine Count

1007554 bp

Guanine Count

684679 bp

Cytosine Count

680457 bp

Genome Length

3379276 bp

Protein-coding Genes

3074 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
family 16 glycosylhydrolaseBST97_RS09890Not AvailableNegative2148056 - 214962758754.4
t9ss type b sorting domain-containing proteinBST97_RS09895Not AvailableNegative2149777 - 215180774435.0
aminotransferase class v-fold plp-dependent enzymeBST97_RS09900Not AvailableNegative2151867 - 215293440457.6
dihydrofolate reductaseBST97_RS09905Not AvailablePositive2153002 - 215390735120.7
acp s-malonyltransferaseBST97_RS09910Not AvailablePositive2153955 - 215483631946.8
rna methyltransferaseBST97_RS09915Not AvailableNegative2154826 - 215537720667.4
type ix secretion system membrane protein porp/sprfBST97_RS09920Not AvailableNegative2155544 - 215655438094.4
nifu family proteinBST97_RS09925Not AvailablePositive2156873 - 215779034359.7
heme o synthaseBST97_RS09930Not AvailablePositive2157982 - 215887533088.2
heme-copper oxidase subunit iiiBST97_RS09935Not AvailablePositive2158879 - 215945721760.1

Displaying genes 1981 – 1990 of 3136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.