Shewanella sp. HN-41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sp. HN-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sp. HN-41 44_47, whole genome shotgun sequence.

Gene Summary

Adenine Count

1181684 bp

Thymine Count

1178286 bp

Guanine Count

1020689 bp

Cytosine Count

1033365 bp

Genome Length

4414027 bp

Protein-coding Genes

4102 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv fimbrial biogenesis protein pilvSOHN41_02961Not AvailableNegative3206330 - 320682117589.0
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseSOHN41_02962Q8EBI7Negative3207095 - 320805134762.4
lipoprotein signal peptidaseSOHN41_02963P0AEM2Negative3208053 - 320847514752.6
lipoprotein signal peptidaseSOHN41_02964Q0HFZ0Negative3208475 - 320898719614.7
isoleucyl-trna synthetaseSOHN41_02965A3D1G5Negative3208997 - 3211819105623.0
riboflavin kinase / fmn adenylyltransferaseSOHN41_02966P0AG42Negative3211852 - 321273332533.1
proposed peptidoglycan lipid ii flippase murjSOHN41_02967O34238Negative3212853 - 321424750785.7
ssu ribosomal protein s20pSOHN41_02968A0KZZ5Positive3214664 - 32149309702.0
transcriptional activator hlyuSOHN41_02969P52695Negative3214991 - 321528711406.0
aminopeptidaseSOHN41_02970Q9WVJ3Positive3215423 - 321683249914.4

Displaying genes 3001 – 3010 of 4180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

218 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 218 metabolites

Health Effects

No health effects information available for this bacterium.