Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m24 family metallopeptidase | SHEW_RS04910 | Not Available | Positive | 1098944 - 1100182 | 45252.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SHEW_RS04915 | Not Available | Negative | 1100395 - 1100868 | 17038.6 |
| duf1294 domain-containing protein | SHEW_RS04920 | Not Available | Negative | 1100955 - 1101305 | 13070.5 |
| hypothetical protein | SHEW_RS04925 | Not Available | Negative | 1101533 - 1102762 | 45825.1 |
| hotdog fold domain-containing protein | SHEW_RS04930 | Not Available | Negative | 1103138 - 1103614 | 17754.1 |
| duf368 domain-containing protein | SHEW_RS04935 | Not Available | Positive | 1103827 - 1104777 | 33883.6 |
| hypothetical protein | SHEW_RS04940 | Not Available | Positive | 1104793 - 1104984 | 6917.12 |
| duf3634 family protein | SHEW_RS04945 | Not Available | Negative | 1105045 - 1105389 | 13050.1 |
| hypothetical protein | SHEW_RS20810 | Not Available | Positive | 1105515 - 1105685 | 6670.0 |
| torf family putative porin | SHEW_RS04950 | Not Available | Negative | 1105803 - 1106522 | 26556.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
