Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SHEW_RS04700 | Not Available | Positive | 1034962 - 1035618 | 24553.2 |
| pseudouridine synthase | SHEW_RS04705 | Not Available | Positive | 1035608 - 1036318 | 26930.9 |
| lysr family transcriptional regulator | SHEW_RS04710 | Not Available | Positive | 1036530 - 1037444 | 34078.9 |
| omca/mtrc family decaheme c-type cytochrome | SHEW_RS04715 | Not Available | Positive | 1037603 - 1039897 | 80220.9 |
| eal domain-containing protein | SHEW_RS04720 | Not Available | Positive | 1040176 - 1042299 | 77901.5 |
| mfs transporter | SHEW_RS04725 | Not Available | Negative | 1042420 - 1043958 | 56188.2 |
| impa family metalloprotease | SHEW_RS04730 | Not Available | Negative | 1044259 - 1047228 | 108259.0 |
| methyl-accepting chemotaxis protein | SHEW_RS04735 | Not Available | Positive | 1047740 - 1049458 | 62168.4 |
| valine--trna ligase | SHEW_RS04740 | Not Available | Negative | 1049573 - 1052452 | 108991.0 |
| dna polymerase iii subunit chi | SHEW_RS04745 | Not Available | Negative | 1052477 - 1052938 | 17117.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
