Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia-forming nitrite reductase cytochrome c552 subunit | SHEW_RS04350 | Not Available | Positive | 967114 - 968514 | 52092.1 |
| hydrolase | SHEW_RS04355 | Not Available | Negative | 968589 - 969131 | 20259.7 |
| p-ii family nitrogen regulator | SHEW_RS04360 | Not Available | Positive | 969384 - 969722 | 12276.9 |
| ammonium transporter | SHEW_RS04365 | Not Available | Positive | 969735 - 970985 | 43667.4 |
| hypothetical protein | SHEW_RS04370 | Not Available | Positive | 971105 - 971431 | 12593.2 |
| tetratricopeptide repeat protein | SHEW_RS04375 | Not Available | Positive | 971524 - 972705 | 45355.1 |
| substrate-binding periplasmic protein | SHEW_RS04380 | Not Available | Negative | 972890 - 973717 | 30489.5 |
| 3-deoxy-7-phosphoheptulonate synthase arog | SHEW_RS04385 | Not Available | Positive | 974065 - 975117 | 38831.5 |
| hypothetical protein | SHEW_RS20660 | Not Available | Negative | 975242 - 975526 | 10632.8 |
| abcb family abc transporter atp-binding protein/permease | SHEW_RS04395 | Not Available | Positive | 975818 - 977593 | 65515.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
