Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS04300 | Not Available | Negative | 956331 - 956543 | 7736.34 |
| erap1-like c-terminal domain-containing protein | SHEW_RS04305 | Not Available | Negative | 956689 - 959337 | 99071.2 |
| penicillin-binding protein activator lpob | SHEW_RS04310 | Not Available | Negative | 959579 - 960172 | 22081.8 |
| cog3014 family protein | SHEW_RS04315 | Not Available | Negative | 960198 - 961607 | 52053.5 |
| slyx family protein | SHEW_RS04320 | Not Available | Negative | 961672 - 961884 | 8091.58 |
| wd40 repeat domain-containing protein | SHEW_RS04325 | Not Available | Negative | 961898 - 962866 | 35223.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SHEW_RS04330 | Not Available | Positive | 963046 - 963813 | 27361.4 |
| yacl family protein | SHEW_RS04335 | Not Available | Positive | 964006 - 964380 | 14012.4 |
| response regulator | SHEW_RS04340 | Not Available | Negative | 964472 - 965101 | 23167.9 |
| nitrate/nitrite two-component system sensor histidine kinase narq | SHEW_RS04345 | Not Available | Negative | 965163 - 966866 | 63602.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
