Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | SHEW_RS04200 | Not Available | Negative | 938276 - 938824 | 20270.8 |
| glucosamine-6-phosphate deaminase | SHEW_RS04205 | Not Available | Positive | 939182 - 939988 | 28597.9 |
| srpbcc family protein | SHEW_RS04210 | Not Available | Positive | 940252 - 940788 | 20209.4 |
| cupin domain-containing protein | SHEW_RS04215 | Not Available | Positive | 940800 - 941117 | 12180.4 |
| peptidase u32 family protein | SHEW_RS04220 | Not Available | Positive | 941285 - 943198 | 70955.4 |
| ph domain-containing protein | SHEW_RS04225 | Not Available | Positive | 943239 - 943613 | 13741.8 |
| aaa family atpase | SHEW_RS04230 | Not Available | Negative | 943663 - 944850 | 43817.5 |
| helix-hairpin-helix domain-containing protein | SHEW_RS04235 | Not Available | Negative | 945007 - 945294 | 10894.0 |
| lyse family translocator | SHEW_RS04240 | Not Available | Negative | 945361 - 945954 | 20499.8 |
| lysr family transcriptional regulator | SHEW_RS04245 | Not Available | Negative | 946201 - 947106 | 34078.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
