Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | SHEW_RS04150 | Not Available | Negative | 917298 - 918002 | 26592.0 |
| duf3019 domain-containing protein | SHEW_RS04155 | Not Available | Negative | 917999 - 918394 | 14851.3 |
| mipa/ompv family protein | SHEW_RS04160 | Not Available | Negative | 918384 - 919220 | 31691.4 |
| s8 family serine peptidase | SHEW_RS20985 | Not Available | Positive | 919978 - 925095 | 183701.0 |
| methyl-accepting chemotaxis protein | SHEW_RS04170 | Not Available | Positive | 925401 - 927065 | 59554.8 |
| formate dehydrogenase subunit alpha | SHEW_RS04175 | Not Available | Negative | 927171 - 931403 | 154166.0 |
| pentapeptide repeat-containing protein | SHEW_RS04180 | Not Available | Negative | 931669 - 932649 | 37010.6 |
| peptide chain release factor 2 | SHEW_RS04185 | Not Available | Positive | 932839 - 933937 | 40900.6 |
| lysine--trna ligase | SHEW_RS04190 | Not Available | Positive | 933950 - 935452 | 57146.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | SHEW_RS04195 | Not Available | Positive | 935751 - 938231 | 91695.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
