Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | SHEW_RS04100 | Not Available | Positive | 906794 - 907978 | 44143.1 |
| hypothetical protein | SHEW_RS04105 | Not Available | Negative | 908006 - 908410 | 14119.0 |
| hypothetical protein | SHEW_RS20895 | Not Available | Negative | 908713 - 908910 | 6498.59 |
| cytochrome c biosynthesis protein | SHEW_RS04115 | Not Available | Negative | 909014 - 910432 | 50732.5 |
| hypothetical protein | SHEW_RS04120 | Not Available | Negative | 910987 - 911424 | 16686.0 |
| marr family winged helix-turn-helix transcriptional regulator | SHEW_RS04125 | Not Available | Positive | 911747 - 912214 | 17390.9 |
| glycerol-3-phosphate dehydrogenase/oxidase | SHEW_RS04130 | Not Available | Positive | 912248 - 913489 | 44989.2 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | SHEW_RS04135 | Not Available | Positive | 913532 - 914671 | 42220.4 |
| chromate efflux transporter | SHEW_RS04140 | Not Available | Positive | 914820 - 916028 | 42373.4 |
| atp-binding protein | SHEW_RS04145 | Not Available | Negative | 916063 - 917301 | 46636.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
