Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | SHEW_RS04000 | Not Available | Positive | 884145 - 886397 | 85589.2 |
| tetr/acrr family transcriptional regulator | SHEW_RS04005 | Not Available | Negative | 886542 - 887099 | 20681.1 |
| dihydrofolate reductase family protein | SHEW_RS04010 | Not Available | Positive | 887199 - 887735 | 19839.0 |
| two-component system response regulator arca | SHEW_RS04015 | Not Available | Negative | 888003 - 888722 | 27191.6 |
| duf3293 domain-containing protein | SHEW_RS04020 | Not Available | Positive | 889300 - 889731 | 16250.4 |
| lysine-sensitive aspartokinase 3 | SHEW_RS04025 | Not Available | Positive | 890141 - 891499 | 48834.4 |
| succinylglutamate desuccinylase/aspartoacylase family protein | SHEW_RS04030 | Not Available | Positive | 891496 - 892602 | 41071.3 |
| s8 family serine peptidase | SHEW_RS04035 | Not Available | Negative | 892722 - 896573 | 133356.0 |
| transcriptional regulator asnc | SHEW_RS04040 | Not Available | Negative | 896794 - 897255 | 16782.3 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | SHEW_RS04045 | Not Available | Negative | 897390 - 898067 | 25680.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
