Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SHEW_RS03695 | Not Available | Positive | 818509 - 819138 | 23042.6 |
| cobalamin-binding protein | SHEW_RS03700 | Not Available | Positive | 819519 - 820343 | 30297.8 |
| mapeg family protein | SHEW_RS03705 | Not Available | Positive | 820404 - 820787 | 13808.3 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS03710 | Not Available | Positive | 821137 - 822399 | 45867.0 |
| hypothetical protein | SHEW_RS03715 | Not Available | Positive | 822411 - 822647 | 8511.54 |
| abc transporter atp-binding protein | SHEW_RS03720 | Not Available | Positive | 822712 - 823434 | 26475.8 |
| abc transporter permease | SHEW_RS03725 | Not Available | Positive | 823446 - 824756 | 48951.1 |
| abc transporter permease | SHEW_RS03730 | Not Available | Positive | 824767 - 825963 | 43794.7 |
| sigma-54-dependent transcriptional regulator | SHEW_RS03735 | Not Available | Positive | 826091 - 827575 | 53631.4 |
| sensor histidine kinase | SHEW_RS03740 | Not Available | Positive | 827575 - 828948 | 51112.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
