Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ipt/tig domain-containing protein | SHEW_RS03280 | Not Available | Negative | 724655 - 728878 | 154296.0 |
| pilus assembly protein | SHEW_RS03285 | Not Available | Negative | 728957 - 729604 | 24149.5 |
| tetratricopeptide repeat protein | SHEW_RS03290 | Not Available | Negative | 729637 - 730119 | 17642.2 |
| duf192 domain-containing protein | SHEW_RS03295 | Not Available | Negative | 730107 - 730451 | 12692.6 |
| type ii secretion system f family protein | SHEW_RS03300 | Not Available | Negative | 730453 - 731316 | 32516.7 |
| type ii secretion system f family protein | SHEW_RS03305 | Not Available | Negative | 731325 - 732176 | 32052.2 |
| atpase, t2ss/t4p/t4ss family | SHEW_RS03310 | Not Available | Negative | 732169 - 733878 | 63054.7 |
| type ii and iii secretion system protein family protein | SHEW_RS03315 | Not Available | Negative | 733888 - 735198 | 47398.6 |
| flp pilus assembly protein cpab | SHEW_RS03320 | Not Available | Negative | 735195 - 736091 | 33083.9 |
| hypothetical protein | SHEW_RS03325 | Not Available | Negative | 736106 - 736297 | 6811.13 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
