Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | SHEW_RS02975 | Not Available | Positive | 655195 - 656412 | 43393.0 |
| arginine n-succinyltransferase | SHEW_RS02980 | Not Available | Positive | 656549 - 657568 | 37771.1 |
| succinylglutamate-semialdehyde dehydrogenase | SHEW_RS02985 | Not Available | Positive | 657578 - 659038 | 51737.8 |
| duf1338 domain-containing protein | SHEW_RS02990 | Not Available | Positive | 659179 - 659979 | 29559.7 |
| atp-binding protein | SHEW_RS02995 | Not Available | Negative | 660077 - 661414 | 49693.3 |
| response regulator transcription factor | SHEW_RS03000 | Not Available | Negative | 661411 - 662085 | 25389.4 |
| pepsy domain-containing protein | SHEW_RS03005 | Not Available | Negative | 662196 - 662534 | 12140.6 |
| camp-activated global transcriptional regulator crp | SHEW_RS03010 | Not Available | Negative | 662616 - 663251 | 23725.0 |
| tetratricopeptide repeat protein | SHEW_RS03015 | Not Available | Positive | 663695 - 664474 | 28130.5 |
| phosphoribulokinase | SHEW_RS03020 | Not Available | Negative | 664811 - 665698 | 33402.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
