Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2333 family protein | SHEW_RS02775 | Not Available | Positive | 612691 - 613662 | 36165.0 |
| tigr04219 family outer membrane beta-barrel protein | SHEW_RS02780 | Not Available | Positive | 613667 - 614425 | 27261.9 |
| outer membrane channel protein tolc | SHEW_RS02785 | Not Available | Negative | 614493 - 615818 | 48460.9 |
| adp-ribose diphosphatase | SHEW_RS02790 | Not Available | Positive | 616103 - 616711 | 23053.3 |
| duf1249 domain-containing protein | SHEW_RS02795 | Not Available | Positive | 616708 - 617154 | 17549.1 |
| 3',5'-cyclic-amp phosphodiesterase | SHEW_RS02800 | Not Available | Positive | 617164 - 618003 | 31086.2 |
| yqia/ycfp family alpha/beta fold hydrolase | SHEW_RS02805 | Not Available | Positive | 618198 - 618776 | 21523.6 |
| dna topoisomerase iv subunit b | SHEW_RS02810 | Not Available | Positive | 618825 - 620711 | 69419.0 |
| pqq-dependent sugar dehydrogenase | SHEW_RS02815 | Not Available | Positive | 620798 - 621925 | 41673.3 |
| dna topoisomerase iv subunit a | SHEW_RS02820 | Not Available | Positive | 621922 - 624189 | 83878.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
