Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS02375 | Not Available | Positive | 519505 - 519813 | 11327.0 |
| hypothetical protein | SHEW_RS02380 | Not Available | Negative | 519932 - 520315 | 13856.7 |
| hypothetical protein | SHEW_RS02385 | Not Available | Negative | 520368 - 520751 | 13799.4 |
| c-type cytochrome domain-containing protein | SHEW_RS02390 | Not Available | Negative | 520912 - 521322 | 14505.4 |
| efflux rnd transporter permease subunit | SHEW_RS02395 | Not Available | Negative | 521519 - 524593 | 112288.0 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS02400 | Not Available | Negative | 524597 - 525679 | 39064.9 |
| lysr family transcriptional regulator | SHEW_RS02405 | Not Available | Positive | 525876 - 526820 | 35539.2 |
| qnr family pentapeptide repeat protein | SHEW_RS02410 | Not Available | Negative | 526823 - 527494 | 25010.3 |
| mate family efflux transporter | SHEW_RS02415 | Not Available | Negative | 527511 - 528878 | 48899.6 |
| co-chaperone groes | SHEW_RS02420 | Not Available | Positive | 529106 - 529396 | 10274.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
