Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | SHEW_RS02320 | Not Available | Negative | 502430 - 503401 | 37216.3 |
| response regulator | SHEW_RS02325 | Not Available | Negative | 503415 - 504410 | 36241.8 |
| crotonase/enoyl-coa hydratase family protein | SHEW_RS02335 | Not Available | Positive | 504816 - 505625 | 29618.3 |
| yqha family protein | SHEW_RS02340 | Not Available | Positive | 505797 - 506294 | 18404.6 |
| duf3530 family protein | SHEW_RS02345 | Not Available | Negative | 506342 - 507226 | 31947.5 |
| rna polymerase-associated protein rapa | SHEW_RS02350 | Not Available | Negative | 507362 - 510268 | 109626.0 |
| phoh family protein | SHEW_RS02355 | Not Available | Positive | 510634 - 512028 | 52054.2 |
| response regulator | SHEW_RS02360 | Not Available | Positive | 512269 - 515961 | 139901.0 |
| zinc-dependent metalloprotease | SHEW_RS02365 | Not Available | Positive | 516184 - 518583 | 88028.6 |
| hypothetical protein | SHEW_RS02370 | Not Available | Negative | 518656 - 519195 | 20864.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
