Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SHEW_RS02180 | Not Available | Positive | 476135 - 476557 | 15538.0 |
| alanine/glycine:cation symporter family protein | SHEW_RS02185 | Not Available | Positive | 476762 - 478135 | 47868.1 |
| abc transporter permease | SHEW_RS02190 | Not Available | Negative | 478213 - 479313 | 40330.8 |
| abc transporter atp-binding protein | SHEW_RS02195 | Not Available | Negative | 479300 - 480322 | 37789.6 |
| hlyd family secretion protein | SHEW_RS02200 | Not Available | Negative | 480322 - 481275 | 34766.8 |
| hypothetical protein | SHEW_RS20800 | Not Available | Negative | 481506 - 481679 | 6463.82 |
| torf family putative porin | SHEW_RS02205 | Not Available | Negative | 482008 - 482700 | 24821.1 |
| hu family dna-binding protein | SHEW_RS02210 | Not Available | Negative | 482940 - 483212 | 9596.51 |
| hypothetical protein | SHEW_RS02215 | Not Available | Negative | 483467 - 483877 | 14801.5 |
| duf4240 domain-containing protein | SHEW_RS02220 | Not Available | Positive | 484163 - 484672 | 19603.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
