Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl/aryl-sulfatase | SHEW_RS19860 | Not Available | Positive | 4562232 - 4564238 | 74200.9 |
| is66 family transposase | SHEW_RS20485 | Not Available | Positive | 4564912 - 4565193 | 10738.8 |
| is66 family transposase | SHEW_RS19870 | Not Available | Negative | 4565633 - 4565800 | 6603.87 |
| is66 family insertion sequence element accessory protein tnpb | SHEW_RS19875 | Not Available | Negative | 4565860 - 4566213 | 13793.9 |
| is66 family insertion sequence element accessory protein tnpa | SHEW_RS19880 | Not Available | Negative | 4566210 - 4566530 | 12030.5 |
| is5 family transposase | SHEW_RS19885 | Not Available | Negative | 4566687 - 4567667 | 37828.7 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | SHEW_RS19890 | Not Available | Negative | 4569026 - 4570855 | 66238.1 |
| deor/glpr family dna-binding transcription regulator | SHEW_RS19895 | Not Available | Negative | 4570891 - 4571661 | 28364.9 |
| tonb-dependent receptor | SHEW_RS19900 | Not Available | Negative | 4571807 - 4573945 | 79918.4 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | SHEW_RS19905 | Not Available | Negative | 4574156 - 4575520 | 48042.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
