Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 4538418 - 4539961 | Not Available |
| cytochrome c oxidase accessory protein ccog | SHEW_RS19765 | Not Available | Negative | 4540595 - 4542022 | 54524.1 |
| hypothetical protein | SHEW_RS19770 | Not Available | Positive | 4542111 - 4542464 | 13450.3 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SHEW_RS19775 | Not Available | Positive | 4542586 - 4543488 | 33674.8 |
| duf2061 domain-containing protein | SHEW_RS19780 | Not Available | Positive | 4543723 - 4543914 | 6915.6 |
| porin family protein | SHEW_RS19785 | Not Available | Positive | 4544107 - 4544649 | 20201.7 |
| cupredoxin domain-containing protein | SHEW_RS19790 | Not Available | Negative | 4544752 - 4545102 | 13000.0 |
| heavy metal translocating p-type atpase | SHEW_RS19795 | Not Available | Negative | 4545112 - 4547355 | 78652.9 |
| merr family transcriptional regulator | SHEW_RS19800 | Not Available | Negative | 4547358 - 4547819 | 17444.7 |
| hypothetical protein | SHEW_RS19805 | Not Available | Negative | 4548184 - 4548615 | 16208.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
