Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | SHEW_RS19710 | Not Available | Negative | 4527540 - 4528028 | 17642.6 |
| rhodanese-like domain-containing protein | SHEW_RS19715 | Not Available | Negative | 4528236 - 4528670 | 15993.7 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SHEW_RS19720 | Not Available | Positive | 4528912 - 4530456 | 55984.0 |
| murein hydrolase activator envc family protein | SHEW_RS19725 | Not Available | Positive | 4530515 - 4531600 | 40268.4 |
| s41 family peptidase | SHEW_RS19730 | Not Available | Positive | 4531636 - 4532841 | 43815.2 |
| divergent polysaccharide deacetylase family protein | SHEW_RS19735 | Not Available | Positive | 4532857 - 4533612 | 27819.8 |
| rrf2 family transcriptional regulator | SHEW_RS19740 | Not Available | Negative | 4533634 - 4534086 | 16651.3 |
| ykgj family cysteine cluster protein | SHEW_RS20480 | Not Available | Negative | 4534097 - 4534351 | 8931.86 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4535055 - 4535170 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4535274 - 4538166 | Not Available |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
