Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pace efflux transporter | SHEW_RS19660 | Not Available | Negative | 4514334 - 4514756 | 16239.1 |
| efflux rnd transporter permease subunit | SHEW_RS19665 | Not Available | Negative | 4514854 - 4517982 | 112205.0 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS19670 | Not Available | Negative | 4517989 - 4519119 | 41054.2 |
| hypothetical protein | SHEW_RS20875 | Not Available | Positive | 4519364 - 4519516 | 5604.98 |
| lysr family transcriptional regulator | SHEW_RS19680 | Not Available | Negative | 4519559 - 4520431 | 32314.0 |
| hypothetical protein | SHEW_RS19685 | Not Available | Positive | 4520536 - 4521231 | 25129.7 |
| mfs transporter | SHEW_RS19690 | Not Available | Negative | 4521294 - 4522394 | 40012.5 |
| s41 family peptidase | SHEW_RS19695 | Not Available | Negative | 4522682 - 4524925 | 84164.0 |
| nad(p)/fad-dependent oxidoreductase | SHEW_RS19700 | Not Available | Negative | 4525075 - 4526259 | 43155.5 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | SHEW_RS19705 | Not Available | Negative | 4526514 - 4527533 | 36059.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
