Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | SHEW_RS19460 | Not Available | Negative | 4471287 - 4471766 | 17098.5 |
| histidine ammonia-lyase | SHEW_RS19465 | Not Available | Negative | 4471917 - 4473449 | 53773.6 |
| urocanate hydratase | SHEW_RS19470 | Not Available | Negative | 4473477 - 4475147 | 60534.1 |
| histidine utilization repressor | SHEW_RS19475 | Not Available | Negative | 4475271 - 4475978 | 26440.6 |
| imidazolonepropionase | SHEW_RS19480 | Not Available | Positive | 4476162 - 4477388 | 44122.9 |
| p-loop ntpase fold protein | SHEW_RS19485 | Not Available | Positive | 4477833 - 4479446 | 61071.7 |
| gdccvxc domain-containing (seleno)protein | SHEW_RS20980 | Not Available | Negative | 4479829 - 4480053 | 8080.81 |
| hypothetical protein | SHEW_RS19495 | Not Available | Positive | 4480367 - 4481443 | 38715.8 |
| helix-turn-helix transcriptional regulator | SHEW_RS19500 | Not Available | Negative | 4481475 - 4482005 | 20122.4 |
| tolc family protein | SHEW_RS19505 | Not Available | Positive | 4482242 - 4483474 | 46161.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
