Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | SHEW_RS19360 | Not Available | Negative | 4448408 - 4449505 | 40492.9 |
| peptide deformylase | SHEW_RS19365 | Not Available | Positive | 4449631 - 4450143 | 19514.5 |
| methionyl-trna formyltransferase | SHEW_RS19370 | Not Available | Positive | 4450151 - 4451125 | 34833.8 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SHEW_RS19375 | Not Available | Positive | 4451122 - 4452405 | 47512.2 |
| trk system potassium transporter trka | SHEW_RS19380 | Not Available | Positive | 4452415 - 4453824 | 51551.1 |
| trkh family potassium uptake protein | SHEW_RS19385 | Not Available | Positive | 4453855 - 4455297 | 52706.9 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | SHEW_RS19390 | Not Available | Negative | 4455319 - 4456515 | 43979.0 |
| flagellar basal body-associated protein flil | SHEW_RS19395 | Not Available | Negative | 4456560 - 4456967 | 15502.0 |
| chorismate--pyruvate lyase family protein | SHEW_RS19400 | Not Available | Positive | 4457143 - 4457709 | 21152.5 |
| immune inhibitor a domain-containing protein | SHEW_RS19405 | Not Available | Negative | 4457740 - 4460595 | 101381.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
