Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | SHEW_RS19310 | Not Available | Positive | 4440161 - 4440718 | 19837.9 |
| duf1488 domain-containing protein | SHEW_RS19315 | Not Available | Negative | 4440853 - 4441125 | 10454.3 |
| shikimate dehydrogenase | SHEW_RS19320 | Not Available | Negative | 4441164 - 4442003 | 29442.1 |
| group ii truncated hemoglobin | SHEW_RS19325 | Not Available | Positive | 4442180 - 4442608 | 16608.1 |
| oxygen-dependent coproporphyrinogen oxidase | SHEW_RS19330 | Not Available | Negative | 4442665 - 4443576 | 34355.4 |
| l-threonylcarbamoyladenylate synthase | SHEW_RS19335 | Not Available | Negative | 4443595 - 4444152 | 19783.8 |
| type i dna topoisomerase | SHEW_RS19340 | Not Available | Negative | 4444254 - 4444817 | 20900.0 |
| collagenase | SHEW_RS19345 | Not Available | Positive | 4444955 - 4446766 | 68216.6 |
| duf494 family protein | SHEW_RS19350 | Not Available | Negative | 4446824 - 4447297 | 18535.2 |
| dna-processing protein dpra | SHEW_RS19355 | Not Available | Negative | 4447300 - 4448319 | 36644.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
