Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilin protein | SHEW_RS21015 | Not Available | Negative | 412388 - 412879 | 17851.2 |
| Trna-ser | Not Available | Not Available | Positive | 413069 - 413159 | Not Available |
| hypothetical protein | SHEW_RS01895 | Not Available | Positive | 413749 - 414147 | 14907.5 |
| ubiquinol oxidase subunit ii | SHEW_RS01900 | Not Available | Positive | 414288 - 415238 | 34817.0 |
| cytochrome o ubiquinol oxidase subunit i | SHEW_RS01905 | Not Available | Positive | 415238 - 417226 | 73995.4 |
| cytochrome o ubiquinol oxidase subunit iii | SHEW_RS01910 | Not Available | Positive | 417223 - 417849 | 22977.4 |
| cytochrome o ubiquinol oxidase subunit iv | SHEW_RS01915 | Not Available | Positive | 417846 - 418172 | 11863.9 |
| heme o synthase | SHEW_RS01920 | Not Available | Positive | 418183 - 419109 | 32902.4 |
| arac family transcriptional regulator | SHEW_RS01925 | Not Available | Negative | 419234 - 420100 | 33415.6 |
| duf3859 domain-containing protein | SHEW_RS01930 | Not Available | Negative | 420195 - 420629 | 16827.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
