Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | SHEW_RS19210 | Not Available | Positive | 4413736 - 4414929 | 43185.6 |
| l-threonine 3-dehydrogenase | SHEW_RS19215 | Not Available | Positive | 4414940 - 4415965 | 37231.9 |
| thiosulfate sulfurtransferase glpe | SHEW_RS19220 | Not Available | Positive | 4416054 - 4416359 | 11212.9 |
| rhomboid family intramembrane serine protease glpg | SHEW_RS19225 | Not Available | Positive | 4416377 - 4417213 | 30737.7 |
| isoprenoid biosynthesis glyoxalase elbb | SHEW_RS19230 | Not Available | Negative | 4417346 - 4417999 | 23082.9 |
| dna polymerase i | SHEW_RS19235 | Not Available | Positive | 4418388 - 4421138 | 101339.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | SHEW_RS19240 | Not Available | Negative | 4421920 - 4422576 | 24176.3 |
| c-type cytochrome | SHEW_RS19245 | Not Available | Positive | 4422745 - 4423365 | 21873.2 |
| methyltransferase domain-containing protein | SHEW_RS19250 | Not Available | Positive | 4424140 - 4424808 | 25698.1 |
| der gtpase-activating protein yihi | SHEW_RS19255 | Not Available | Positive | 4424856 - 4425389 | 20179.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
