Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | SHEW_RS19160 | Not Available | Positive | 4403439 - 4404230 | 29609.5 |
| glycosyltransferase | SHEW_RS19165 | Not Available | Negative | 4404227 - 4405351 | 41307.7 |
| hypothetical protein | SHEW_RS19170 | Not Available | Negative | 4405317 - 4406393 | 39601.2 |
| glycosyltransferase family 9 protein | SHEW_RS19175 | Not Available | Negative | 4406512 - 4407591 | 39472.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SHEW_RS19180 | Not Available | Positive | 4407727 - 4408275 | 21051.7 |
| dtdp-glucose 4,6-dehydratase | SHEW_RS19185 | Not Available | Positive | 4408268 - 4409338 | 39305.5 |
| dtdp-4-dehydrorhamnose reductase | SHEW_RS19190 | Not Available | Positive | 4409367 - 4410296 | 34498.8 |
| 3-deoxy-d-manno-octulosonic acid kinase | SHEW_RS19195 | Not Available | Positive | 4410362 - 4411087 | 27503.8 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | SHEW_RS19200 | Not Available | Negative | 4411115 - 4412380 | 46112.3 |
| tetr/acrr family transcriptional regulator | SHEW_RS19205 | Not Available | Positive | 4412666 - 4413319 | 25104.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
