Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS18875 | Not Available | Negative | 4344040 - 4344309 | 10270.2 |
| hypothetical protein | SHEW_RS18880 | Not Available | Negative | 4344752 - 4345345 | 23259.5 |
| hypothetical protein | SHEW_RS18885 | Not Available | Negative | 4345388 - 4345882 | 18383.2 |
| hypothetical protein | SHEW_RS20760 | Not Available | Negative | 4346051 - 4346401 | 13115.8 |
| hypothetical protein | SHEW_RS20765 | Not Available | Negative | 4346995 - 4347465 | 17786.1 |
| hypothetical protein | SHEW_RS18890 | Not Available | Negative | 4348350 - 4348700 | 13308.7 |
| class i sam-dependent methyltransferase | SHEW_RS18895 | Not Available | Negative | 4348874 - 4349653 | 28378.2 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | SHEW_RS18900 | Not Available | Positive | 4349816 - 4350655 | 31532.8 |
| duf4440 domain-containing protein | SHEW_RS18905 | Not Available | Negative | 4350684 - 4351046 | 13778.8 |
| lytic transglycosylase domain-containing protein | SHEW_RS18910 | Not Available | Negative | 4351052 - 4351783 | 26853.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
