Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | SHEW_RS18675 | Not Available | Negative | 4301446 - 4302303 | 32470.6 |
| permease-like cell division protein ftsx | SHEW_RS18680 | Not Available | Negative | 4302598 - 4303563 | 35510.9 |
| cell division atp-binding protein ftse | SHEW_RS18685 | Not Available | Negative | 4303578 - 4304279 | 25689.6 |
| signal recognition particle-docking protein ftsy | SHEW_RS18690 | Not Available | Negative | 4304363 - 4306048 | 62057.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SHEW_RS18695 | Not Available | Positive | 4306297 - 4306884 | 21851.3 |
| duf1145 domain-containing protein | SHEW_RS18700 | Not Available | Positive | 4306884 - 4307174 | 10834.9 |
| type ii secretion system protein n | SHEW_RS18705 | Not Available | Negative | 4307253 - 4308014 | 27304.2 |
| type ii secretion system protein m | SHEW_RS18710 | Not Available | Negative | 4308035 - 4308511 | 17615.1 |
| type ii secretion system protein gspl | SHEW_RS18715 | Not Available | Negative | 4308513 - 4309703 | 43642.6 |
| type ii secretion system minor pseudopilin gspk | SHEW_RS18720 | Not Available | Negative | 4309788 - 4310786 | 36708.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
