Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | SHEW_RS18575 | Not Available | Negative | 4280417 - 4281052 | 24471.0 |
| hypothetical protein | SHEW_RS18580 | Not Available | Negative | 4281064 - 4281411 | 13176.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SHEW_RS18585 | Not Available | Positive | 4281680 - 4283785 | 77819.8 |
| pp_03627 | SHEW_RS18590 | Not Available | Negative | 4283973 - 4284575 | Not Available |
| hypothetical protein | SHEW_RS18595 | Not Available | Positive | 4284800 - 4285753 | 35842.8 |
| multidrug effflux mfs transporter | SHEW_RS18600 | Not Available | Negative | 4285833 - 4287035 | 42882.1 |
| lysr substrate-binding domain-containing protein | SHEW_RS18605 | Not Available | Positive | 4287146 - 4288138 | 37273.6 |
| hypothetical protein | SHEW_RS18610 | Not Available | Positive | 4288280 - 4288630 | 13010.9 |
| hypothetical protein | SHEW_RS18615 | Not Available | Negative | 4288620 - 4289903 | 48487.7 |
| tetratricopeptide repeat protein | SHEW_RS18620 | Not Available | Negative | 4289980 - 4291398 | 52707.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
