Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | SHEW_RS18470 | Not Available | Negative | 4257269 - 4260379 | 113495.0 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS18475 | Not Available | Negative | 4260376 - 4261683 | 48046.6 |
| tetr/acrr family transcriptional regulator | SHEW_RS18480 | Not Available | Negative | 4261676 - 4262329 | 24870.2 |
| cation diffusion facilitator family transporter | SHEW_RS18485 | Not Available | Negative | 4262463 - 4263332 | 31461.3 |
| spy/cpxp family protein refolding chaperone | SHEW_RS18490 | Not Available | Negative | 4263398 - 4263880 | 18191.0 |
| response regulator | SHEW_RS18495 | Not Available | Positive | 4264116 - 4264799 | 25693.5 |
| atp-binding protein | SHEW_RS18500 | Not Available | Positive | 4264799 - 4266166 | 51092.0 |
| mdr family oxidoreductase | SHEW_RS18505 | Not Available | Negative | 4266250 - 4267230 | 34491.9 |
| sigma-54-dependent fis family transcriptional regulator | SHEW_RS18510 | Not Available | Negative | 4267334 - 4269109 | 66062.5 |
| aldehyde dehydrogenase family protein | SHEW_RS18515 | Not Available | Positive | 4269448 - 4270968 | 55423.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
