Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m14 family metallocarboxypeptidase | SHEW_RS18420 | Not Available | Positive | 4246258 - 4247082 | 30369.7 |
| aminotransferase class v-fold plp-dependent enzyme | SHEW_RS18425 | Not Available | Negative | 4247251 - 4248363 | 41311.2 |
| prnb family protein | SHEW_RS18430 | Not Available | Negative | 4248367 - 4249539 | 43849.4 |
| lrp/asnc family transcriptional regulator | SHEW_RS18435 | Not Available | Positive | 4249727 - 4250188 | 17187.9 |
| duf4124 domain-containing protein | SHEW_RS18440 | Not Available | Positive | 4250255 - 4250797 | 19660.7 |
| nitrogen regulation protein nr(ii) | SHEW_RS18445 | Not Available | Positive | 4250924 - 4251979 | 38881.8 |
| nitrogen regulation protein nr(i) | SHEW_RS18450 | Not Available | Positive | 4252021 - 4253430 | 51855.2 |
| lysr family transcriptional regulator | SHEW_RS18455 | Not Available | Positive | 4253687 - 4254577 | 33491.7 |
| hypothetical protein | SHEW_RS18460 | Not Available | Positive | 4255044 - 4255901 | 31435.7 |
| duf4785 domain-containing protein | SHEW_RS18465 | Not Available | Positive | 4255912 - 4257198 | 45580.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
