Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac | SHEW_RS01785 | Not Available | Positive | 391653 - 393173 | 53356.0 |
| tlpa family protein disulfide reductase | SHEW_RS01790 | Not Available | Negative | 393299 - 393934 | 23579.9 |
| cytochrome c-type biogenesis protein ccmh | SHEW_RS20290 | Not Available | Negative | 393931 - 394377 | 16375.9 |
| heme lyase ccmf/nrfe family subunit | SHEW_RS01800 | Not Available | Negative | 394380 - 396335 | 71679.1 |
| cytochrome c3 family protein | SHEW_RS01805 | Not Available | Positive | 396809 - 398848 | 75793.4 |
| rhodanese-like domain-containing protein | SHEW_RS01810 | Not Available | Positive | 398930 - 399355 | 15622.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SHEW_RS01815 | Not Available | Positive | 399440 - 400225 | 27833.3 |
| tetratricopeptide repeat protein | SHEW_RS01820 | Not Available | Positive | 400254 - 400946 | 25562.8 |
| 4fe-4s dicluster domain-containing protein | SHEW_RS01825 | Not Available | Positive | 401007 - 401711 | 25243.3 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | SHEW_RS01830 | Not Available | Positive | 401714 - 402661 | 34212.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
