Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | SHEW_RS18125 | Not Available | Positive | 4183670 - 4184293 | 23023.3 |
| dna-directed rna polymerase subunit omega | SHEW_RS18130 | Not Available | Positive | 4184353 - 4184634 | 10201.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | SHEW_RS18135 | Not Available | Positive | 4184648 - 4186753 | 78864.5 |
| rida family protein | SHEW_RS18140 | Not Available | Positive | 4186788 - 4187171 | 13791.7 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | SHEW_RS18145 | Not Available | Positive | 4187240 - 4187944 | 26298.4 |
| amp-binding protein | SHEW_RS18150 | Not Available | Positive | 4188286 - 4189941 | 61035.1 |
| calcium/sodium antiporter | SHEW_RS18155 | Not Available | Positive | 4190118 - 4191050 | 32090.1 |
| hypothetical protein | SHEW_RS18160 | Not Available | Positive | 4191250 - 4191915 | 23734.1 |
| sensor histidine kinase | SHEW_RS18165 | Not Available | Positive | 4192016 - 4193107 | 40264.3 |
| response regulator transcription factor | SHEW_RS18170 | Not Available | Positive | 4193115 - 4193711 | 21375.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
