Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SHEW_RS17930 | Not Available | Negative | 4139913 - 4141283 | 48832.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | SHEW_RS17935 | Not Available | Negative | 4141280 - 4142749 | 52724.0 |
| peptidoglycan glycosyltransferase ftsi | SHEW_RS17940 | Not Available | Negative | 4142746 - 4144482 | 63851.1 |
| cell division protein ftsl | SHEW_RS17945 | Not Available | Negative | 4144479 - 4144793 | 12419.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | SHEW_RS17950 | Not Available | Negative | 4144831 - 4145772 | 34877.6 |
| division/cell wall cluster transcriptional repressor mraz | SHEW_RS17955 | Not Available | Negative | 4145806 - 4146264 | 17355.9 |
| peptidase | SHEW_RS17960 | Not Available | Positive | 4146679 - 4147389 | 26661.3 |
| 2fe-2s iron-sulfur cluster-binding protein | SHEW_RS17965 | Not Available | Positive | 4147386 - 4148513 | 41749.2 |
| hypothetical protein | SHEW_RS17970 | Not Available | Positive | 4148680 - 4148988 | 11816.0 |
| glycerol kinase glpk | SHEW_RS17975 | Not Available | Negative | 4149031 - 4150527 | 54397.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
