Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase flavoprotein subunit | SHEW_RS01735 | Not Available | Positive | 378664 - 380670 | 73873.3 |
| fumarate reductase iron-sulfur subunit | SHEW_RS01740 | Not Available | Positive | 380667 - 381398 | 27453.5 |
| lysr family transcriptional regulator | SHEW_RS01745 | Not Available | Positive | 381590 - 382513 | 34264.2 |
| transcription termination factor rho | SHEW_RS01750 | Not Available | Negative | 382589 - 383854 | 47115.2 |
| thioredoxin trxa | SHEW_RS01755 | Not Available | Negative | 384085 - 384411 | 11817.2 |
| atp-dependent rna helicase rhlb | SHEW_RS01760 | Not Available | Positive | 384583 - 385890 | 48776.5 |
| exopolyphosphatase | SHEW_RS01765 | Not Available | Positive | 385890 - 386822 | 33152.1 |
| tonb-dependent receptor domain-containing protein | SHEW_RS01770 | Not Available | Positive | 387111 - 389840 | 99137.7 |
| thioredoxin family protein | SHEW_RS01775 | Not Available | Negative | 389891 - 390427 | 19899.8 |
| nucleoside triphosphate pyrophosphohydrolase family protein | SHEW_RS01780 | Not Available | Negative | 390657 - 391235 | 21815.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
