Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | SHEW_RS17770 | Not Available | Negative | 4103663 - 4105033 | 52689.8 |
| type iv-a pilus assembly atpase pilb | SHEW_RS17775 | Not Available | Positive | 4105375 - 4107084 | 63029.9 |
| type ii secretion system f family protein | SHEW_RS17780 | Not Available | Positive | 4107121 - 4108389 | 45845.8 |
| prepilin peptidase | SHEW_RS17785 | Not Available | Positive | 4108428 - 4109339 | 33777.9 |
| dephospho-coa kinase | SHEW_RS17790 | Not Available | Positive | 4109360 - 4109965 | 21868.3 |
| cell division protein zapd | SHEW_RS17795 | Not Available | Positive | 4109974 - 4110708 | 28895.6 |
| dna gyrase inhibitor yacg | SHEW_RS17800 | Not Available | Positive | 4110757 - 4110969 | 8078.5 |
| 8-oxo-dgtp diphosphatase mutt | SHEW_RS17805 | Not Available | Positive | 4110970 - 4111359 | 14540.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4112265 - 4112380 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4112494 - 4115386 | Not Available |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
