Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spondin domain-containing protein | SHEW_RS17670 | Not Available | Positive | 4073202 - 4073903 | 23594.0 |
| spondin domain-containing protein | SHEW_RS17675 | Not Available | Positive | 4073913 - 4074641 | 25397.7 |
| response regulator transcription factor | SHEW_RS17680 | Not Available | Positive | 4074739 - 4075467 | 27307.8 |
| sensor histidine kinase | SHEW_RS17685 | Not Available | Positive | 4075470 - 4076951 | 54603.0 |
| hypothetical protein | SHEW_RS17690 | Not Available | Negative | 4076960 - 4077175 | 7852.03 |
| uroporphyrinogen decarboxylase | SHEW_RS17695 | Not Available | Negative | 4077352 - 4078416 | 39244.2 |
| rsd/algq family anti-sigma factor | SHEW_RS17700 | Not Available | Positive | 4078894 - 4079364 | 17772.0 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | SHEW_RS17705 | Not Available | Negative | 4079474 - 4082071 | 93659.5 |
| hexitol phosphatase hxpb | SHEW_RS17710 | Not Available | Positive | 4082485 - 4083156 | 24058.9 |
| m13 family metallopeptidase | SHEW_RS17715 | Not Available | Negative | 4083244 - 4085298 | 77247.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
