Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SHEW_RS17620 | Not Available | Positive | 4057576 - 4058511 | 34968.2 |
| yebc/pmpr family dna-binding transcriptional regulator | SHEW_RS17625 | Not Available | Positive | 4058620 - 4059345 | 26649.3 |
| duf4382 domain-containing protein | SHEW_RS17630 | Not Available | Positive | 4059737 - 4060768 | 36201.8 |
| so_0444 family cu/zn efflux transporter | SHEW_RS17635 | Not Available | Negative | 4060864 - 4062288 | 48999.4 |
| zn(2+)-responsive transcriptional regulator | SHEW_RS17640 | Not Available | Negative | 4062292 - 4062768 | 17799.1 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SHEW_RS17645 | Not Available | Positive | 4063067 - 4064656 | 57229.2 |
| phosphoribosylamine--glycine ligase | SHEW_RS17650 | Not Available | Positive | 4064708 - 4066009 | 45939.4 |
| hypothetical protein | SHEW_RS17655 | Not Available | Positive | 4066298 - 4069300 | 106336.0 |
| sdr family oxidoreductase | SHEW_RS17660 | Not Available | Negative | 4069409 - 4070215 | 28772.5 |
| eal domain-containing protein | SHEW_RS17665 | Not Available | Negative | 4070305 - 4072878 | 95736.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
