Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mj1255/vc2487 family glycosyltransferase | SHEW_RS17420 | Not Available | Negative | 4016607 - 4017659 | 39031.4 |
| phosphatase pap2 family protein | SHEW_RS17425 | Not Available | Negative | 4017685 - 4018215 | 19180.6 |
| ygjv family protein | SHEW_RS17430 | Not Available | Negative | 4018320 - 4018574 | 9240.59 |
| ribonuclease e activity regulator rraa | SHEW_RS17435 | Not Available | Positive | 4018911 - 4019396 | 16949.9 |
| hypothetical protein | SHEW_RS17440 | Not Available | Negative | 4019944 - 4020363 | 15748.1 |
| formimidoylglutamase | SHEW_RS17445 | Not Available | Positive | 4021340 - 4022383 | 36908.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | SHEW_RS17450 | Not Available | Positive | 4022609 - 4023364 | 27858.6 |
| scp2 domain-containing protein | SHEW_RS17455 | Not Available | Positive | 4023585 - 4024208 | 23593.4 |
| ubiquinone biosynthesis regulatory protein kinase ubib | SHEW_RS17460 | Not Available | Positive | 4024205 - 4025854 | 63186.7 |
| sec-independent protein translocase subunit tata | SHEW_RS17465 | Not Available | Positive | 4025915 - 4026145 | 8182.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
