Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS17370 | Not Available | Negative | 4006345 - 4007574 | 43768.0 |
| tolc family protein | SHEW_RS17375 | Not Available | Negative | 4007656 - 4008936 | 46457.2 |
| hypothetical protein | SHEW_RS17380 | Not Available | Negative | 4009148 - 4009579 | 15817.9 |
| duf3012 domain-containing protein | SHEW_RS17385 | Not Available | Negative | 4009720 - 4009902 | 6450.75 |
| stas/sec14 domain-containing protein | SHEW_RS17390 | Not Available | Negative | 4009952 - 4010335 | 14012.9 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | SHEW_RS17395 | Not Available | Positive | 4010448 - 4010858 | 15387.6 |
| type ii 3-dehydroquinate dehydratase | SHEW_RS17400 | Not Available | Positive | 4010975 - 4011427 | 16387.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SHEW_RS17405 | Not Available | Positive | 4011434 - 4011865 | 15554.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | SHEW_RS17410 | Not Available | Positive | 4011906 - 4013258 | 48639.6 |
| hd domain-containing phosphohydrolase | SHEW_RS17415 | Not Available | Negative | 4013329 - 4016526 | 119428.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
