Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase d family protein | SHEW_RS17320 | Not Available | Positive | 3991483 - 3993333 | 69485.6 |
| pseudouridine synthase | SHEW_RS17325 | Not Available | Negative | 3993368 - 3994276 | 34299.4 |
| lon peptidase substrate-binding domain-containing protein | SHEW_RS17330 | Not Available | Negative | 3994343 - 3994921 | 21931.5 |
| alpha/beta hydrolase | SHEW_RS17335 | Not Available | Negative | 3995132 - 3996187 | 39022.8 |
| hypothetical protein | SHEW_RS17340 | Not Available | Positive | 3996305 - 3996745 | 16443.4 |
| duf3080 family protein | SHEW_RS17345 | Not Available | Positive | 3996774 - 3997832 | 40167.6 |
| yhch/yjgk/yial family protein | SHEW_RS17350 | Not Available | Positive | 3997922 - 3998383 | 17716.2 |
| aminotransferase class v-fold plp-dependent enzyme | SHEW_RS17355 | Not Available | Positive | 3998747 - 4001026 | 82042.5 |
| hypothetical protein | SHEW_RS17360 | Not Available | Negative | 4001107 - 4002327 | 45202.1 |
| efflux rnd transporter permease subunit | SHEW_RS17365 | Not Available | Negative | 4003102 - 4006332 | 115048.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
